ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0197485
Analysis Project Name Prefix Actinomadura umbrina DSM 43927
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 186228
Completion Status Complete
Completion Date 2018-05-02
PI Hans-Peter Klenk
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6831
Estimated Size 7396071
Sequencing Depth (MIGS-31.1) 143x
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-06-29
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2778260945
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sequencing the genomes of 1000 actinobacteria strains
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1147506 (Portal)
ITS Analysis Project Name Actinomadura umbrina DSM 43927
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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