ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0197126
Analysis Project Name Prefix Sorted cell/s from freshwater from Lake Michigan, Michigan, United States - Synechococcus bacterium JGI_UCMI16033
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 139306
Completion Status Complete
IMG Completion Date 2017-07-04
PI Maureen Coleman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
Scaffold Count 129
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2051
Estimated Size 1961572
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-06-28
Last Modified By JGI automated process on 2021-03-14
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300019414
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater picocyanobacteria communities from the Laurentian Great Lakes, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1150069 (Portal)
ITS Analysis Project Name Synechococcus bacterium JGI_UCMI16033
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS Version Number 1

 

 

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