ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0193654
Analysis Project Name Prefix Nocardiopsis sp. CNZ308
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 194710
Completion Status Complete
IMG Completion Date 2018-08-24
PI paul r. jensen
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. smrtanalysis/2.3.0_p5, HGAP 3
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5809
Estimated Size 6727629
Sequencing Depth (MIGS-31.1) 183x
Annotation Pipeline IMG Annotation Pipeline v.4.16.4
Added By JGI automated process on 2017-06-08
Last Modified By JGI automated process on 2019-05-06
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2791354860
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequnecing to address fundamental questions about secondary metabolites and their potential function as extracellular electron shuttles (EESs)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1141839 (Portal)
ITS Analysis Project Name Nocardiopsis sp. CNZ308
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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