ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0193625 |
Analysis Project Name |
Thaumarchaeota archaeon JGI _01_D19 (contamination screened) |
Analysis Project Name Stem |
Thaumarchaeota archaeon JGI _01_D19 |
Analysis Project Name Suffix
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Analysis Project Type
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Single Cell Analysis (screened) |
IMG Submission ID
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139378 |
Completion Status |
Complete |
IMG Completion Date
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2017-07-17 |
PI | Edward DeLong |
Analysis Project Description
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Contamination Screening Method
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Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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spades v. 3.9.0 |
IMG Decontamination
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Yes |
IMG Decontamination Method
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PhiX decontamination |
Number of tRNAs
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tRNA Software
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Completeness Strategy
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Scaffold Count
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14 |
Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
285 |
Estimated Size |
220674 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.4.15.1 |
Added By | JGI automated process on 2017-06-08 |
Last Modified By | JGI automated process on 2021-11-07 |
ORF Comparison Tools
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16S Recovered
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16S Recovery Software
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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2739367755 |
Genbank Accession
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Genbank Release Date |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Comprehensive metagenome and single cell genome sequencing from the open ocean community of North Pacfic Subtropical Gyre, Station ALOHA |
Number of Studies
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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1 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1110474 (Portal) |
ITS Analysis Project Name
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Thaumarchaeota archaea JGI _01_D19 Screened |
ITS Analysis Product Name
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Microbial Minimal Draft Single Cell Screened Genome |
ITS Version Number |
1 |
Library Names
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BUOWB |
JGI Award DOI
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