ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0191675
Analysis Project Name Sphingomonas sp. PP-CE-3G-477
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 141480
Completion Status Complete
IMG Completion Date 2017-07-31
PI William Whitman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 31
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3803
Estimated Size 4090908
Sequencing Depth (MIGS-31.1) 237x
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-05-22
Last Modified By JGI automated process on 2021-12-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2740891853
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase V (KMG-V): Genome sequencing to study the core and pangenomes of soil and plant-associated prokaryotes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1145643 (Portal)
ITS Analysis Project Name Sphingomonas sp. PP-CE-3G-477
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001079

 

 

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