ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0189689
Analysis Project Name Prefix Cellvibrio sp. YR554
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 136051
Completion Status Complete
IMG Completion Date 2017-06-28
PI Dale Pelletier
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.9.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 30
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4002
Estimated Size 4690596
Sequencing Depth (MIGS-31.1) 278x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-05-15
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2738541276
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Populus root and rhizosphere microbial communities from Tennessee, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1146820 (Portal)
ITS Analysis Project Name Cellvibrio sp. YR554
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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