ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0181127
Analysis Project Name Prefix Variovorax sp. 54
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 134519
Completion Status Complete
IMG Completion Date 2017-06-16
PI Ludmila Chistoserdova
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0_p5,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6109
Estimated Size 6642361
Sequencing Depth (MIGS-31.1) 97x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-03-07
Last Modified By JGI automated process on 2020-12-05
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2737472017
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID PEFF00000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Synthetic bacterial communities of pure cultures isolated from sediment of Lake Washington, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1137929 (Portal)
ITS Analysis Project Name Variovorax sp. 54
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS Version Number 1

 

 

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