ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0175347
Analysis Project Name Prefix Vibrio scophthalmi VS-05
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 118234
Completion Status Complete
Completion Date 2017-03-09
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SMRT analysis v. 2.3.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 4
Contig Count 4
Gene Calling Method (MIGS-32)
Gene Count 4474
Estimated Size 4802851
Sequencing Depth (MIGS-31.1) 70x
Annotation Pipeline IMG Annotation Pipeline v.4.14.6
Added By JGI automated process on 2017-02-21
Last Modified By JGI automated process on 2017-11-17
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2718218187
IMG RNA-Seq ID
Genbank
Genbank ID CP016414 (GCA_001687805.1)
Release Date 2016-07-21
NCBI Genbank Version CP016414.1
Genbank ID CP016416 (GCA_001687805.1)
Release Date 2016-07-21
NCBI Genbank Version CP016416.1
Genbank ID CP016417 (GCA_001687805.1)
Release Date 2016-07-21
NCBI Genbank Version CP016417.1
Genbank ID CP016415 (GCA_001687805.1)
Release Date 2016-07-21
NCBI Genbank Version CP016415.1
Assembly Accession GCA_001687805.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio scophthalmi VS-05
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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