ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0172275
Analysis Project Name Prefix Candidatus Marithrix sp. Canyon 246
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 169777
Completion Status Complete
Completion Date 2018-03-13
PI Barbara MacGregor
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 64
Contig Count 66
Gene Calling Method (MIGS-32)
Gene Count 3365
Estimated Size 3215810
Sequencing Depth (MIGS-31.1) 380.0x
Annotation Pipeline IMG Annotation Pipeline v.4.16.1
Added By JGI automated process on 2017-02-03
Last Modified By JGI automated process on 2018-03-27
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2772190729
IMG RNA-Seq ID
Genbank
Genbank ID MCBW00000000 (GCA_001723665.1)
Release Date 2016-09-15
NCBI Genbank Version MCBW01
Assembly Accession GCA_001723665.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Candidatus Marithrix sp. Canyon 246
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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