ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0137422
Analysis Project Name Prefix Groundwater sediment microbial communities from an aquifer in Colorado, USA - East MetaG ERMZT551_2
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 102330
Completion Status Complete
Completion Date 2016-11-19
PI Jill Banfield
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MEGAHIT v. MEGAHIT v1.0.6
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 456018
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 632585
Estimated Size 284551640
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.13.0
Added By JGI automated process on 2016-09-15
Last Modified By JGI automated process on 2017-02-25
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300011416
IMG RNA-Seq ID
Genbank ID
Assembly Accession
Assembly Methods
ANALYSIS PROJECT COMPOSITION
Study Groundwater sediment microbial communities from an aquifer adjacent to Colorado River, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1120428 (Portal)
ITS Analysis Project Name East River MetaG ERMZT551_2
ITS Analysis Product Name Metagenome Minimal Draft
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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