ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0136744
Analysis Project Name Prefix Janthinobacterium sp. TND4EL3
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 104901
Completion Status Complete
Completion Date 2016-12-09
PI Sarah Lebeis
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 74
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5924
Estimated Size 6516874
Sequencing Depth (MIGS-31.1) 154x
Annotation Pipeline IMG Annotation Pipeline v.4.13.2
Added By JGI automated process on 2016-08-30
Last Modified By JGI automated process on 2018-08-23
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2708742400
IMG RNA-Seq ID
Genbank
Genbank ID FTMV00000000 (GCA_900156175.1)
Release Date 2017-04-17
NCBI Genbank Version FTMV01
Assembly Accession GCA_900156175.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aquatic microbiome from duckweeds obtained from Rutgers Duckweed Stock Cooperative (RDSC)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1115864 (Portal)
ITS Analysis Project Name Janthinobacterium sp TND4EL3
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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