ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0136656 |
Analysis Project Name |
Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA |
Analysis Project Name Suffix
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|
Analysis Project Type
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Metagenome Analysis |
IMG Submission ID
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94862 |
Completion Status |
Complete |
IMG Completion Date
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2016-09-02 |
PI | Barbara Campbell |
Analysis Project Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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MEGAHIT v. 1.0.6 |
Scaffold Count
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2672309 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
3015502 |
Estimated Size |
974379851 |
Sequencing Depth
(MIGS-31.1)
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|
Genbank Anomalous Assembly |
|
Genbank Anomalous Reason |
|
Annotation Pipeline |
IMG Annotation Pipeline v.4.11.4 |
Added By | JGI automated process on 2016-08-26 |
Last Modified By | JGI automated process on 2021-11-07 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300010318 |
IMG Metagenome bin count |
6 |
IMG Predicted viruses |
991 |
Genbank Accession
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Genbank Release Date |
|
SRA Runs |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1120225 (Portal) |
ITS Analysis Project Name
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CPBay_Sum_15_0.8_DNA(v2) |
ITS Analysis Product Name
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Metagenome Minimal Draft |
ITS Version Number |
2 |
Library Names
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BAYXS |
JGI Award DOI
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10.46936/10.25585/60000748 |
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