ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0132876
Analysis Project Name Prefix Vibrio cholerae M1327
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 143630
Completion Status Complete
Completion Date 2017-08-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.6
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 59
Contig Count 89
Gene Calling Method (MIGS-32)
Gene Count 4167
Estimated Size 4104373
Sequencing Depth (MIGS-31.1) 48.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-07-01
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2744054594
IMG RNA-Seq ID
Genbank
Genbank ID LRFE00000000 (GCA_001641765.1)
Release Date 2016-05-10
NCBI Genbank Version LRFE01
Assembly Accession GCA_001641765.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Vibrio cholerae M1327 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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