ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0132754
Analysis Project Name Prefix Pseudovibrio sp. Ad26
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 143529
Completion Status Complete
IMG Completion Date 2017-08-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.0; Spades v. 3.1.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 77
Contig Count 159
Gene Calling Method (MIGS-32)
Gene Count 5761
Estimated Size 6131532
Sequencing Depth (MIGS-31.1) 50.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-07-01
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2744054493
IMG RNA-Seq ID
Genbank
Genbank ID LMCE00000000 (GCA_001623285.1)
Release Date 2016-04-21
NCBI Genbank Version LMCE01
Assembly Accession GCA_001623285.1
Genbank Release Date 2016-04-21
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Pseudovibrio genome sequencing - University College Cork
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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