ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0131992
Analysis Project Name Prefix Rhodobacter sp. 24-YEA-8
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 94315
Completion Status Complete
Completion Date 2016-08-31
PI Kristen M. DeAngelis PhD
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0_p5,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 7
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4857
Estimated Size 5011740
Sequencing Depth (MIGS-31.1) 117x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-06-29
Last Modified By JGI automated process on 2017-09-15
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2693429821
IMG RNA-Seq ID
Genbank
Genbank ID FNSK00000000 (GCA_900105075.1)
Release Date 2017-07-29
NCBI Genbank Version FNSK01
Assembly Accession GCA_900105075.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sequencing of bacterial isolates from soil warming experiment in Harvard Forest, Massachusetts, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1111401 (Portal)
ITS Analysis Project Name Rhodobacter sp. 24-YEA-8
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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