ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0131073
Analysis Project Name Prefix Nitrospinae bacterium SAG AG-538-I02
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 89765
Completion Status Complete
Completion Date 2016-06-30
PI Ramunas Stepanauskas
Description As described in Bigelow SCGC webpage
Contamination Screening Method As described in Bigelow SCGC webpage
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Spades 3.6
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 92
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 983
Estimated Size 944595
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By Ramunas Stepanauskas on 2016-06-17
Last Modified By JGI automated process on 2018-02-14
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2681812873
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Dark ocean microbial single cell genomics
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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