ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0130979
Analysis Project Name Prefix Pseudomonas aeruginosa AU17550
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 142190
Completion Status Complete
Completion Date 2017-07-31
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 35
Contig Count 35
Gene Calling Method (MIGS-32)
Gene Count 5894
Estimated Size 6255564
Sequencing Depth (MIGS-31.1) 30.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-17
Last Modified By JGI automated process on 2016-06-19
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2740892096
IMG RNA-Seq ID
Genbank ID
Genbank ID LRZZ00000000 (GCA_001555015.1)
Release Date 2016-05-12
NCBI Genbank Version LRZZ01
Assembly Accession
Assembly Accession GCA_001555015.1
Assembly Methods
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Pseudomonas aeruginosa isolates recovered from cystic fibrosis sputum
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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