ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0130872
Analysis Project Name Prefix Streptococcus pyogenes SST2241-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 134405
Completion Status Complete
Completion Date 2017-06-16
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. JULY-2015
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 15
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1831
Estimated Size 1832398
Sequencing Depth (MIGS-31.1) 133.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-17
Last Modified By JGI automated process on 2016-06-19
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2737472014
IMG RNA-Seq ID
Genbank
Genbank ID LRHG00000000 (GCA_001638805.1)
Release Date 2016-05-12
NCBI Genbank Version LRHG01
Assembly Accession GCA_001638805.1
ANALYSIS PROJECT COMPOSITION
Study Sequencing of Streptococcus pyogenes human skin isolates from households in Darwin, Australia
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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