ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0130870
Analysis Project Name Prefix Streptococcus pyogenes SST2238-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 90891
Completion Status Complete
Completion Date 2016-07-12
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. JULY-2015
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 19
Contig Count 19
Gene Calling Method (MIGS-32)
Gene Count 1814
Estimated Size 1810918
Sequencing Depth (MIGS-31.1) 133.0x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-06-17
Last Modified By JGI automated process on 2016-06-19
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2684622768
IMG RNA-Seq ID
Genbank
Genbank ID LRHE00000000 (GCA_001638755.1)
Release Date 2016-05-12
NCBI Genbank Version LRHE01
Assembly Accession GCA_001638755.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sequencing of Streptococcus pyogenes human skin isolates from households in Darwin, Australia
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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