ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0129318
Analysis Project Name Prefix Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 94475
Completion Status Complete
IMG Completion Date 2016-10-24
PI Barbara Campbell
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MEGAHIT v. MEGAHIT v1.0.6
Scaffold Count 1455083
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1792128
Estimated Size 704239017
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.12.1
Added By JGI automated process on 2016-06-10
Last Modified By JGI automated process on 2019-10-06
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300011009
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1110834 (Portal)
ITS Analysis Project Name CPBay_Spr_0.1_0.8_DNA
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1

 

 

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