ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128909
Analysis Project Name Prefix Methylobacterium indicum NS229
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 129358
Completion Status Complete
Completion Date 2017-05-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC Genomics Workbench v. 7.5
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 352
Contig Count 443
Gene Calling Method (MIGS-32)
Gene Count 5976
Estimated Size 6291173
Sequencing Depth (MIGS-31.1) 110x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2018-12-02
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731957888
IMG RNA-Seq ID
Genbank
Genbank ID LDRM00000000 (GCA_001476215.1)
Release Date 2015-12-23
NCBI Genbank Version LDRM01
Assembly Accession GCA_001476215.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study To understand ecology and evolution of rice seed associated bacteria by whole genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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