ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128647
Analysis Project Name Xylanimicrobium pachnodae JCM 13526, NBRC 107786
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 129145
Completion Status Complete
IMG Completion Date 2017-05-11
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) newbler v. 3.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 70
Contig Count 79
Gene Calling Method (MIGS-32)
Gene Count 3760
Estimated Size 3998253
Sequencing Depth (MIGS-31.1) 141x
Genbank Anomalous Assembly Yes
Genbank Anomalous Reason contaminated
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-06-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731957681
Genbank Accession
Genbank ID BCWJ00000000 (GCA_001592145.1)
Release Date 2016-03-04
NCBI Genbank Version BCWJ01
Genbank Release Date 2016-03-04
ANALYSIS PROJECT COMPOSITION
Study Xylanimicrobium pachnodae JCM 13526, NBRC 107786
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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