ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128276
Analysis Project Name Prefix Pseudovibrio denitrificans JCM 12308
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 90153
Completion Status Complete
IMG Completion Date 2016-06-30
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.8
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 77
Contig Count 94
Gene Calling Method (MIGS-32)
Gene Count 6231
Estimated Size 6041798
Sequencing Depth (MIGS-31.1) 23x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-06-08
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2681812989
IMG RNA-Seq ID
Genbank
Genbank ID BAZK00000000 (GCA_001310815.1)
Release Date 2015-10-15
NCBI Genbank Version BAZK01
Assembly Accession GCA_001310815.1
Genbank Release Date 2015-10-15
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Pseudovibrio denitrificans JCM 12308
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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