ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0127144
Analysis Project Name Prefix Flavobacterium psychrophilum 11754
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 112958
Completion Status Complete
IMG Completion Date 2017-04-28
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes Genome Assembler v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 83
Contig Count 433
Gene Calling Method (MIGS-32)
Gene Count 2668
Estimated Size 2788565
Sequencing Depth (MIGS-31.1) 50.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-05-31
Last Modified By JGI automated process on 2016-06-02
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2728369067
IMG RNA-Seq ID
Genbank
Genbank ID LNTP00000000 (GCA_001510875.1)
Release Date 2016-01-16
NCBI Genbank Version LNTP01
Assembly Accession GCA_001510875.1
Genbank Release Date 2016-01-16
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Flavobacterium psychrophilum Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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