ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0125557
Analysis Project Name Prefix Paracoccus sphaerophysae HAMBI 3106
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 111154
Completion Status Complete
Completion Date 2017-02-02
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 130
Contig Count 137
Gene Calling Method (MIGS-32)
Gene Count 3431
Estimated Size 3353799
Sequencing Depth (MIGS-31.1) 19.0x
Annotation Pipeline IMG Annotation Pipeline v.4.14.3
Added By JGI automated process on 2016-05-27
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2713897090
IMG RNA-Seq ID
Genbank
Genbank ID JRKS00000000 (GCA_000763805.1)
Release Date 2015-08-16
NCBI Genbank Version JRKS01
Assembly Accession GCA_000763805.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Paracoccus species genome sequencing - NY State Dept. of Health
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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