ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0123314
Analysis Project Name Prefix Pseudomonas syringae pv. apii BS0426
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 89964
Completion Status Complete
Completion Date 2016-06-30
PI Joyce Loper
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 41
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5560
Estimated Size 6086712
Sequencing Depth (MIGS-31.1) 246x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-05-13
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2681812920
IMG RNA-Seq ID
Genbank
Genbank ID PPYD00000000
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of a diverse group of Pseudomonas species
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1105396 (Portal)
ITS Analysis Project Name Pseudomonas syringae pv. apiiBS0426
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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