ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0122453
Analysis Project Name Prefix Mycobacteroides sp. H110
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 96150
Completion Status Complete
IMG Completion Date 2016-10-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 110
Contig Count 126
Gene Calling Method (MIGS-32)
Gene Count 5879
Estimated Size 5698262
Sequencing Depth (MIGS-31.1) 39.0x
Annotation Pipeline IMG Annotation Pipeline v.4.12.0
Added By JGI automated process on 2016-05-10
Last Modified By JGI automated process on 2018-07-02
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2698536626
Genbank Accession
Genbank ID LJYR00000000 (GCA_001440265.1)
Release Date 2015-11-18
NCBI Genbank Version LJYR01
Assembly Accession GCA_001440265.1
Genbank Release Date 2015-11-18
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of isolates from drinking water distribution system in Cincinnati, Ohio
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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