ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0119967
Analysis Project Name Prefix Freshwater microbial communities from Crystal Geyser, Utah, USA - CG_3.0
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 119267
Completion Status Complete
IMG Completion Date 2017-03-11
PI
Analysis Project Description Assembly and annotation of public SRA data set.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly, Nielsen et. al.
Scaffold Count 1232597
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1880132
Estimated Size 1002797603
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.14.6
Added By JGI automated process on 2016-05-06
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300014060
IMG Metagenome bin count 34
IMG Predicted viruses 116
Genbank Accession
Genbank Release Date
SRA Runs
 
SRA Run Id SRR1534387  (Link to NCBI )
ANALYSIS PROJECT COMPOSITION
Study Freshwater microbial communities from Crystal Geyser, Utah, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 70

 

 

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