ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0115458
Analysis Project Name Prefix Chitinophaga sp. YR573
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 93057
Completion Status Complete
Completion Date 2016-08-11
PI Dale Pelletier
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 8
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6607
Estimated Size 8066695
Sequencing Depth (MIGS-31.1) 185x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-03-27
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2690315653
IMG RNA-Seq ID
Genbank
Genbank ID FOJF00000000 (GCA_900110995.1)
Release Date 2017-08-02
NCBI Genbank Version FOJF01
Assembly Accession GCA_900110995.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Populus root and rhizosphere microbial communities from Tennessee, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1093965 (Portal)
ITS Analysis Project Name Chitinophaga sp. YR573
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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