ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0112259
Analysis Project Name Prefix Vibrio metoecus YB5B06
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 93974
Completion Status Complete
IMG Completion Date 2016-08-31
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC Genomics Workbench De Novo Assemblerv. 6.5.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 71
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3626
Estimated Size 3938456
Sequencing Depth (MIGS-31.1) 801.0x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2693429609
IMG RNA-Seq ID
Genbank
Genbank ID LBGQ00000000 (GCA_001402345.1)
Release Date 2015-10-23
NCBI Genbank Version LBGQ01
Assembly Accession GCA_001402345.1
Genbank Release Date 2015-10-23
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio metoecus and Vibrio cholerae strains co-occurring in the environment
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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