ANALYSIS PROJECT INFORMATION | |||||||
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GOLD Analysis Project ID
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Ga0111765 |
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Analysis Project Name Prefix |
Oblitimonas alkaliphila D3318 |
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Analysis Project Name Suffix
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Analysis Project Type
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Genome Analysis (Isolate) |
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IMG Submission ID
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85345 | ||||||
Completion Status |
Complete |
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IMG Completion Date
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2016-04-20 |
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PI | |||||||
PI Name |
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Analysis Project Description
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Submitting a public genome from NCBI/GenBank to IMG for analysis. |
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Visibility | Public | ||||||
ANALYSIS PROJECT METADATA | |||||||
Assembly Method
(MIGS-30)
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CLC Genomics Workbench Assembler v. 7.5;Manual Curation v. 2015-04 |
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IMG Decontamination
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Yes |
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IMG Decontamination Method
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PhiX decontamination |
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Scaffold Count
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1 |
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Contig Count
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1 |
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Gene Calling Method
(MIGS-32)
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Gene Count |
2208 |
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Estimated Size |
2294397 |
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Sequencing Depth
(MIGS-31.1)
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250.0x |
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Annotation Pipeline |
IMG Annotation Pipeline v.4.10.2 |
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Added By |
JGI automated process
on 2016-02-19 |
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Last Modified By |
JGI automated process
on 2018-07-02 |
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ORF Comparison Tools
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16S Recovered
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16S Recovery Software
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PROJECT EXTERNAL REFERENCES | |||||||
IMG Taxon ID
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2663763088 |
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Genbank Accession
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Assembly Accession |
GCA_001267255.1 |
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Genbank Release Date |
2015-12-24 |
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ANALYSIS PROJECT COMPOSITION | |||||||
Study |
Genome sequences of Oblitimonas alkaliphila, a novel bacterium of the pseudomonadaceae family |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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