ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0109064
Analysis Project Name Prefix Vibrio parahaemolyticus S012
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 88217
Completion Status Complete
IMG Completion Date 2016-05-26
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 1.06
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 439
Contig Count 533
Gene Calling Method (MIGS-32)
Gene Count 4747
Estimated Size 5029093
Sequencing Depth (MIGS-31.1) 86.8x
Annotation Pipeline IMG Annotation Pipeline v.4.11.0
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2671180972
IMG RNA-Seq ID
Genbank
Genbank ID AWMX00000000 (GCA_000491935.1)
Release Date 2015-08-01
NCBI Genbank Version AWMX01
Assembly Accession GCA_000491935.1
Genbank Release Date 2015-08-01
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for population analysis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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