ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106628
Analysis Project Name Prefix Carnobacterium maltaromaticum DSM 20342
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 98958
Completion Status Complete
Completion Date 2016-10-19
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 76
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3607
Estimated Size 3739439
Sequencing Depth (MIGS-31.1) 100x
Annotation Pipeline IMG Annotation Pipeline v.4.12.0
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2700989263
IMG RNA-Seq ID
Genbank
Genbank ID JQBG00000000 (GCA_001437315.1)
Release Date 2015-11-08
NCBI Genbank Version JQBG01
Assembly Accession GCA_001437315.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Expanding the biotechnology potential of lactobacilli through comparative genomics - Inner Mongolia Agricultural University
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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