ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106589
Analysis Project Name Prefix Vibrio parahaemolyticus CFSAN007455
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 82448
Completion Status Complete
Completion Date 2016-04-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 176
Contig Count 217
Gene Calling Method (MIGS-32)
Gene Count 5323
Estimated Size 5032793
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.10.2
Added By JGI automated process on 2016-02-04
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2660238519
IMG RNA-Seq ID
Genbank
Genbank ID JNTL00000000 (GCA_000706985.1)
Release Date 2015-08-09
NCBI Genbank Version JNTL01
Assembly Accession GCA_000706985.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for rapid detection foodborne illness outbreaks
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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