ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106588
Analysis Project Name Prefix Vibrio parahaemolyticus CFSAN007453
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 85663
Completion Status Complete
IMG Completion Date 2016-04-20
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 160
Contig Count 186
Gene Calling Method (MIGS-32)
Gene Count 5231
Estimated Size 5051186
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.10.2
Added By JGI automated process on 2016-02-04
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2663763406
IMG RNA-Seq ID
Genbank
Genbank ID JNTK00000000 (GCA_000707825.1)
Release Date 2015-08-09
NCBI Genbank Version JNTK01
Assembly Accession GCA_000707825.1
Genbank Release Date 2015-08-09
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for rapid detection foodborne illness outbreaks
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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