ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106490
Analysis Project Name Prefix Chlamydia trachomatis LGV1339
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 98920
Completion Status Complete
Completion Date 2016-10-19
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 77
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1151
Estimated Size 1181741
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.12.0
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2700989225
IMG RNA-Seq ID
Genbank
Genbank ID CVND00000000 (GCA_001317705.1)
Release Date 2015-10-27
NCBI Genbank Version CVND01
Assembly Accession GCA_001317705.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of pathogenic Chlamydia trachomatis isolates to determine their global phylogeny
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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