ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0104399
Analysis Project Name Prefix Selenomonas ruminantium L14
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 80447
Completion Status Complete
IMG Completion Date 2016-03-14
PI William Kelly
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. r46652
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 24
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3289
Estimated Size 3300102
Sequencing Depth (MIGS-31.1) 305x
Annotation Pipeline IMG Annotation Pipeline v.4.10.0
Added By JGI automated process on 2016-01-08
Last Modified By JGI automated process on 2017-09-15
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2654588115
IMG RNA-Seq ID
Genbank
Genbank ID FOJX00000000 (GCA_900111915.1)
Release Date 2017-04-05
NCBI Genbank Version FOJX01
Assembly Accession GCA_900111915.1
Genbank Release Date 2017-04-05
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study The Hungate 1000. A catalogue of reference genomes from the rumen microbiome.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1082075 (Portal)
ITS Analysis Project Name Selenomonas ruminantium L14
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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