| ANALYSIS PROJECT INFORMATION | |||||||
|---|---|---|---|---|---|---|---|
GOLD Analysis Project ID
|
Ga0104357 |
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| Analysis Project Name Prefix |
Methanobrevibacter gottschalkii DSM 11978 |
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|
Analysis Project Name Suffix
|
|
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|
Analysis Project Type
|
Genome Analysis |
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|
IMG Submission ID
|
80514 |
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| Completion Status |
Complete |
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|
Completion Date
|
2016-03-14 |
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| PI | William Kelly | ||||||
|
Description
|
|
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| Visibility | Public | ||||||
| ANALYSIS PROJECT METADATA | |||||||
|
Assembly Method
(MIGS-30)
|
ALLPATHS v. r46652 |
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|
IMG Decontamination
|
Yes |
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|
IMG Decontamination Method
|
PhiX decontamination |
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| GenePRIMP |
Yes |
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|
Scaffold Count
|
20 |
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|
Contig Count
|
|
||||||
|
Gene Calling Method
(MIGS-32)
|
|
||||||
| Gene Count |
1942 |
||||||
| Estimated Size |
1864477 |
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|
Sequencing Depth
(MIGS-31.1)
|
675x |
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| Annotation Pipeline |
|
||||||
| Added By |
JGI automated process
on 2016-01-08 |
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| Last Modified By |
JGI automated process
on 2017-09-15 |
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| Non-SP-Owner AP |
No |
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| PROJECT EXTERNAL REFERENCES | |||||||
|
IMG Taxon ID
|
2654588138 |
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| IMG RNA-Seq ID |
|
||||||
|
Genbank ID
|
|
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| Assembly Accession |
|
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| Assembly Methods |
|
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| ANALYSIS PROJECT COMPOSITION | |||||||
| Study |
The Hungate 1000. A catalogue of reference genomes from the rumen microbiome. |
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|
Number of Studies
|
1 |
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|
Number of Projects
|
1 |
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|
Number of Related Analysis Projects
|
0 |
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|
Derived Analysis Projects
|
0 |
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| JGI INFORMATION | |||||||
|
ITS Analysis Project ID
|
1081953 (Portal) |
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|
ITS Analysis Project Name
|
Methanobrevibacter gottschalkii DSM 11978 |
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|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
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| ITS NCBI Taxon ID |
|
||||||
| ITS Version Number |
1 |
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