ANALYSIS PROJECT INFORMATION | |||||||
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GOLD Analysis Project ID
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Ga0104357 |
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Analysis Project Name Prefix |
Methanobrevibacter gottschalkii DSM 11978 |
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Analysis Project Name Suffix
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Analysis Project Type
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Genome Analysis |
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IMG Submission ID
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80514 |
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Completion Status |
Complete |
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Completion Date
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2016-03-14 |
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PI | William Kelly | ||||||
Description
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Visibility | Public | ||||||
ANALYSIS PROJECT METADATA | |||||||
Assembly Method
(MIGS-30)
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ALLPATHS v. r46652 |
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IMG Decontamination
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Yes |
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IMG Decontamination Method
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PhiX decontamination |
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GenePRIMP |
Yes |
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Scaffold Count
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20 |
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Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
1942 |
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Estimated Size |
1864477 |
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Sequencing Depth
(MIGS-31.1)
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675x |
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Annotation Pipeline |
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Added By |
JGI automated process
on 2016-01-08 |
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Last Modified By |
JGI automated process
on 2017-09-15 |
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Non-SP-Owner AP |
No |
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PROJECT EXTERNAL REFERENCES | |||||||
IMG Taxon ID
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2654588138 |
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IMG RNA-Seq ID |
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Genbank ID
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Assembly Accession |
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Assembly Methods |
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ANALYSIS PROJECT COMPOSITION | |||||||
Study |
The Hungate 1000. A catalogue of reference genomes from the rumen microbiome. |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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Derived Analysis Projects
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0 |
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JGI INFORMATION | |||||||
ITS Analysis Project ID
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1081953 (Portal) |
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ITS Analysis Project Name
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Methanobrevibacter gottschalkii DSM 11978 |
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ITS Analysis Product Name
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Microbial Minimal Draft Isolate Genome |
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ITS NCBI Taxon ID |
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ITS Version Number |
1 |
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