ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0104129
Analysis Project Name Prefix Chlamydia pecorum L1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 77892
Completion Status Complete
Completion Date 2016-01-22
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC NGS Cell v. 7.5.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 6
Contig Count 6
Gene Calling Method (MIGS-32)
Gene Count 995
Estimated Size 1113816
Sequencing Depth (MIGS-31.1) 2569.0x
Annotation Pipeline
Added By JGI automated process on 2015-12-29
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2648501761
IMG RNA-Seq ID
Genbank
Genbank ID CM003639 (GCA_001469535.1)
Release Date 2015-12-25
NCBI Genbank Version CM003639.1
Genbank ID LFRH00000000 (GCA_001469535.1)
Release Date 2015-12-22
NCBI Genbank Version LFRH01
Assembly Accession GCA_001469535.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Chlamydia pecorum strains from pig
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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