ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0102426
Analysis Project Name Prefix Methylophilus sp. Leaf414
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76669
Completion Status Complete
IMG Completion Date 2015-12-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) A5 v. 20140605
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 9
Contig Count 9
Gene Calling Method (MIGS-32)
Gene Count 2926
Estimated Size 3028624
Sequencing Depth (MIGS-31.1) 300.0x
Annotation Pipeline
Added By JGI automated process on 2015-12-08
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2643221826
IMG RNA-Seq ID
Genbank
Genbank ID LMQQ00000000 (GCA_001425425.1)
Release Date 2015-11-04
NCBI Genbank Version LMQQ01
Assembly Accession GCA_001425425.1
Genbank Release Date 2015-11-04
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Arabidopsis leaf and root microbiota representing the majority of bacterial species in their natural communities
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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