ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0102211
Analysis Project Name Prefix Sphingopyxis sp. Root214
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76451
Completion Status Complete
Completion Date 2015-12-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) A5 v. 20140604
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 7
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4453
Estimated Size 4724829
Sequencing Depth (MIGS-31.1) 300.0x
Annotation Pipeline
Added By JGI automated process on 2015-12-08
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2643221608
IMG RNA-Seq ID
Genbank
Genbank ID LMIG00000000 (GCA_001429105.1)
Release Date 2015-11-04
NCBI Genbank Version LMIG01
Assembly Accession GCA_001429105.1
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Arabidopsis leaf and root microbiota representing the majority of bacterial species in their natural communities
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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