ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0102199
Analysis Project Name Prefix Acidovorax sp. Root70
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76439
Completion Status Complete
Completion Date 2015-12-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) A5 v. 20140605
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 32
Contig Count 32
Gene Calling Method (MIGS-32)
Gene Count 4685
Estimated Size 5006805
Sequencing Depth (MIGS-31.1) 300.0x
Annotation Pipeline
Added By JGI automated process on 2015-12-08
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2643221596
IMG RNA-Seq ID
Genbank
Genbank ID LMHQ00000000 (GCA_001428225.1)
Release Date 2015-11-05
NCBI Genbank Version LMHQ01
Assembly Accession GCA_001428225.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Arabidopsis leaf and root microbiota representing the majority of bacterial species in their natural communities
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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