ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0099798
Analysis Project Name Prefix Marine eukaryotic communities from CALCOFI LINE 67, Pacific Ocean - CN13ID_Sort29A_1
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 89870
Completion Status Complete
IMG Completion Date 2016-06-22
PI Alexandra Worden
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.2
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 4359
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 30859
Estimated Size 29742266
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.11.3
Added By JGI automated process on 2015-10-29
Last Modified By JGI automated process on 2018-08-23
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300009743
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Marine eukaryotic communities from CALCOFI LINE 67, Pacific Ocean, that are photosynthetic
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1086506 (Portal)
ITS Analysis Project Name Uncultured metagenome CN13ID_Sort29A_1
ITS Analysis Product Name Amplified, Random, Cell Enrichment
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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