ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0097632
Analysis Project Name Prefix Clostridium perfringens FORC_003
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 79011
Completion Status Complete
IMG Completion Date 2016-03-14
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SMRT Portal HGAP v. 3
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 1
Contig Count 2
Gene Calling Method (MIGS-32)
Gene Count 3066
Estimated Size 3338532
Sequencing Depth (MIGS-31.1) 207x
Annotation Pipeline
Added By JGI automated process on 2015-10-09
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2654587741
IMG RNA-Seq ID
Genbank
Genbank ID CP009558 (GCA_001304735.1)
Release Date 2016-01-27
NCBI Genbank Version CP009558.1
Genbank ID CP009557 (GCA_001304735.1)
Release Date 2015-10-01
NCBI Genbank Version CP009557.1
Assembly Accession GCA_001304735.1
Genbank Release Date 2016-01-27
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Food borne pathogens from South Korea - FORC, Seoul
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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