ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0081132
Analysis Project Name Prefix Photobacterium swingsii CAIM 1393
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 75665
Completion Status Complete
IMG Completion Date 2016-01-22
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.3
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 67
Contig Count 98
Gene Calling Method (MIGS-32)
Gene Count 5539
Estimated Size 5508385
Sequencing Depth (MIGS-31.1) 27.0x
Annotation Pipeline
Added By JGI automated process on 2015-09-11
Last Modified By JGI automated process on 2017-11-27
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2648501459
IMG RNA-Seq ID
Genbank
Genbank ID LELC00000000 (GCA_001077885.1)
Release Date 2015-07-16
NCBI Genbank Version LELC01
Assembly Accession GCA_001077885.1
Genbank Release Date 2015-07-16
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Photobacterium swingsii strain:CAIM 1393 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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