ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0079812
Analysis Project Name Prefix Pseudovibrio sp. Tun.PSC04-5.I4
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 72905
Completion Status Complete
IMG Completion Date 2015-10-20
PI Alison Murray
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination No
IMG Decontamination Method
GenePRIMP
Scaffold Count 8
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6201
Estimated Size 6549844
Sequencing Depth (MIGS-31.1) 92x
Annotation Pipeline
Added By JGI automated process on 2015-08-24
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2636416046
IMG RNA-Seq ID
Genbank
Genbank ID FNLB00000000 (GCA_900104145.1)
Assembly Accession GCA_900104145.1
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lake Vida brine microbial community (LVBMCo) genomics and transcriptomics - a window into diversity, adaptation and processes in extreme cold
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1075164 (Portal)
ITS Analysis Project Name Pseudovibrio sp. Tun.PSC04-5.I4
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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