ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0077632
Analysis Project Name Prefix Lactobacillus paracasei DSM 20207
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76010
Completion Status Complete
IMG Completion Date 2016-01-05
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 2.2.4
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 84
Contig Count 92
Gene Calling Method (MIGS-32)
Gene Count 3060
Estimated Size 3017840
Sequencing Depth (MIGS-31.1) 200.0x
Annotation Pipeline
Added By JGI automated process on 2015-07-06
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2645727808
IMG RNA-Seq ID
Genbank
Genbank ID JYBD00000000 (GCA_000949485.1)
Release Date 2015-03-19
NCBI Genbank Version JYBD01
Assembly Accession GCA_000949485.1
Genbank Release Date 2015-03-19
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lactobacillus paracasei strain:DSM 20207 Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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