ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0075509
Analysis Project Name Prefix Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_RNA2
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 73470
Completion Status Complete
IMG Completion Date 2015-11-01
PI Barbara Campbell
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 0.2.0
Scaffold Count 524480
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 561917
Estimated Size 170937741
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2015-06-24
Last Modified By JGI automated process on 2021-11-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300006390
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1074434 (Portal)
ITS Analysis Project Name DEBay_Sum_22_N_>0.8_RNA2
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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