ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0075141
Analysis Project Name Prefix Gramella sp. MAR_2010_147
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 71543
Completion Status Complete
Completion Date 2015-10-08
PI Hanno Teeling
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2889
Estimated Size 3158483
Sequencing Depth (MIGS-31.1) 169x
Annotation Pipeline
Added By JGI automated process on 2015-06-24
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2634166336
IMG RNA-Seq ID
Genbank
Genbank ID LT629741 (GCA_900105135.1)
Release Date 2016-10-21
NCBI Genbank Version LT629741.1
Assembly Accession GCA_900105135.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study A large-scale integrated study on North Sea by COGITO (Coastal Microbe Genomic & Taxonomic Observatory)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1070398 (Portal)
ITS Analysis Project Name Gramella sp. MAR_2010_147
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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