ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0074892
Analysis Project Name Prefix Rhodobacter litoris JA431
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 141362
Completion Status Complete
Completion Date 2017-07-31
PI William Whitman
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 28
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3737
Estimated Size 3874755
Sequencing Depth (MIGS-31.1) 281x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2015-06-24
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2740891830
IMG RNA-Seq ID
Genbank
Genbank ID OBMP00000000 (GCA_900217725.1)
Release Date 2017-10-15
NCBI Genbank Version OBMP01
Assembly Accession GCA_900217725.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II (KMG-II): from individual species to whole genera
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1068434 (Portal)
ITS Analysis Project Name Rhodobacter litoris JA431
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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